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Templates are predefined queries, each has a simple form and a description. Click on a template to run it, you can search for templates by keyword and filter them by category.
SRA Runs and Study used in LncRNA predictions
Retrive Gene expression profile filtered by TMP or read count
Show the proteins for a particular gene.
Gene --> Expression Profile by SRA Run
Sequence Alteration By Type
For a particular gene, search for overlapping genes.
For a given gene or gene list, return the protein and protein sequence. Default settings will return only the canonical sequence from Swissprot. Select false to return all isoform sequences. Turn off Data Set filter to return proteins from both Swissprot and Trembl.
Search for GO annotations for a particular gene (or List of Genes).
For a Gene (or List of Genes) with GO Annotation, returns a subset of genes with that particular GO anotation. Used to filter lasrge Gene sets by GO term.
Search for Genes in a specified organism that are associated with a particular Gene Ontology (GO) annotation.
Get all SRA Experiments for an organism
Show the genes located between two points on a chromosome. [Keywords: span, region, co-ordinates]
For a specified organism and chromosomal location show all genes, transcripts and exons
Show the chromosome and the chromosome location of a particular gene.
Show all the proteins from a particular organism.